A. Maxwell Burroughs : rechercher sur Z-Library

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1

Natural history of the E1-like superfamily: Implication for adenylation, sulfur transfer, and ubiquitin conjugation

A. Maxwell Burroughs, Lakshminarayan M. Iyer, L. Aravind

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2009

Langue:

english

Fichier:

PDF, 754 KB

english, 2009

2

The X-ray crystallographic structure and activity analysis of a Pseudomonas-specific subfamily of the HAD enzyme superfamily evidences a novel biochemical function

Ezra Peisach, Liangbing Wang, A. Maxwell Burroughs, L. Aravind, Debra Dunaway-Mariano, Karen N. Allen

Journal:

Proteins: Structure, Function, and Bioinformatics

Année:

2008

Langue:

english

Fichier:

PDF, 551 KB

english, 2008

3

Evolutionary Genomics of the HAD Superfamily: Understanding the Structural Adaptations and Catalytic Diversity in a Superfamily of Phosphoesterases and Allied Enzymes

A. Maxwell Burroughs, Karen N. Allen, Debra Dunaway-Mariano, L. Aravind

Journal:

Journal of Molecular Biology

Année:

2006

Langue:

english

Fichier:

PDF, 2.78 MB

english, 2006

4

Anatomy of the E2 ligase fold: Implications for enzymology and evolution of ubiquitin/Ub-like protein conjugation

A. Maxwell Burroughs, Marcie Jaffee, Lakshminarayan M. Iyer, L. Aravind

Journal:

Journal of Structural Biology

Année:

2008

Langue:

english

Fichier:

PDF, 5.18 MB

english, 2008

5

Small but versatile: the extraordinary functional and structural diversity of the β-grasp fold

A Maxwell Burroughs, S Balaji, Lakshminarayan M Iyer, L Aravind

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 3.11 MB

english, 2007

6

A novel superfamily containing the β-grasp fold involved in binding diverse soluble ligands

A Maxwell Burroughs, S Balaji, Lakshminarayan M Iyer, L Aravind

Journal:

Année:

2007

Langue:

english

Fichier:

PDF, 780 KB

english, 2007

7

Structural and Functional Characterization of MppR, an Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus : Functional Diversity in the Acetoacetate Decarboxylase-like Superfamily

Burroughs, A. Maxwell, Hoppe, Robert W., Goebel, Neal C., Sayyed, Bilal H., Voegtline, Tyler J., Schwabacher, Alan W., Zabriskie, T. Mark, Silvaggi, Nicholas R.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 2.14 MB

english, 2013

8

The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like β-grasp domains

Lakshminarayan M Iyer, A Maxwell Burroughs, L Aravind

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 4.03 MB

english, 2006

9

Two novel PIWI families: roles in inter-genomic conflicts in bacteria and Mediator-dependent modulation of transcription in eukaryotes

A Maxwell Burroughs, Lakshminarayan M Iyer, L Aravind

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 3.14 MB

english, 2013

10

Comprehensive analysis of the HEPN superfamily: identification of novel roles in intra-genomic conflicts, defense, pathogenesis and RNA processing

Vivek Anantharaman, Kira S Makarova, A Maxwell Burroughs, Eugene V Koonin…

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.92 MB

english, 2013

11

Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila

Cernilogar, Filippo M., Onorati, Maria Cristina, Kothe, Greg O., Burroughs, A. Maxwell, Parsi, Krishna Mohan, Breiling, Achim, Sardo, Federica Lo, Saxena, Alka, Miyoshi, Keita, Siomi, Haruhiko, Siomi,

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 801 KB

english, 2011

12

Resilience of biochemical activity in protein domains in the face of structural divergence

Zhang, Dapeng, Iyer, Lakshminarayan M, Burroughs, A Maxwell, Aravind, L

Journal:

Current Opinion in Structural Biology

Année:

2014

Langue:

english

Fichier:

PDF, 2.29 MB

english, 2014

13

Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins

Iyer, Lakshminarayan M., Abhiman, Saraswathi, Maxwell Burroughs, A., Aravind, L.

Journal:

Molecular BioSystems

Année:

2009

Langue:

english

Fichier:

PDF, 5.26 MB

english, 2009

14

Functional diversification of the RING finger and other binuclear treble clef domains in prokaryotes and the early evolution of the ubiquitin system

Burroughs, A. Maxwell, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Molecular BioSystems

Année:

2011

Langue:

english

Fichier:

PDF, 4.89 MB

english, 2011

15

New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing

Burroughs, Alexander Maxwell, Ando, Yoshinari, Aravind, L

Journal:

Wiley Interdisciplinary Reviews: RNA

Année:

2014

Langue:

english

Fichier:

PDF, 687 KB

english, 2014

16

Exploring allosteric activation of LigAB from Sphingobium sp. strain SYK-6 through kinetics, mutagenesis and computational studies

Barry, Kevin Patrick, Ngu, Abraham, Cohn, Erin Frances, Cote, Joy Marie, Burroughs, A. Maxwell, Gerbino, Jason Paul, Taylor, Erika Anne

Journal:

Archives of Biochemistry and Biophysics

Année:

2015

Langue:

english

Fichier:

PDF, 1.25 MB

english, 2015

17

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA

Iyer, L. M., Zhang, D., Maxwell Burroughs, A., Aravind, L.

Journal:

Nucleic Acids Research

Année:

2013

Langue:

english

Fichier:

PDF, 10.06 MB

english, 2013

18

A highly conserved family of domains related to the DNA-glycosylase fold helps predict multiple novel pathways for RNA modifications

Burroughs, A Maxwell, Aravind, L

Journal:

Année:

2014

Langue:

english

Fichier:

PDF, 5.76 MB

english, 2014

19

The eukaryotic translation initiation regulator CDC123 defines a divergent clade of ATP-grasp enzymes with a predicted role in novel protein modifications

Burroughs, A Maxwell, Zhang, Dapeng, Aravind, L

Journal:

Année:

2015

Langue:

english

Fichier:

PDF, 1.75 MB

english, 2015

20

Analysis of two domains with novel RNA-processing activities throws light on the complex evolution of ribosomal RNA biogenesis

Burroughs, A. Maxwell, Aravind, L.

Journal:

Frontiers in Genetics

Année:

2014

Langue:

english

Fichier:

PDF, 8.08 MB

english, 2014

21

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

Burroughs, A. Maxwell, Zhang, Dapeng, Schäffer, Daniel E., Iyer, Lakshminarayan M., Aravind, L.

Journal:

Nucleic Acids Research

Année:

2015

Langue:

english

Fichier:

PDF, 9.28 MB

english, 2015

22

Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin

Burroughs, Alexander Maxwell, Ando, Yoshinari, de Hoon, Michiel Laurens, Tomaru, Yasuhiro, Suzuki, Harukazu, Hayashizaki, Yoshihide, Daub, Carsten Olivier

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.77 MB

english, 2011

23

Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors

Zhang, Dapeng, Burroughs, A. Maxwell, Vidal, Newton D., Iyer, Lakshminarayan M., Aravind, L.

Journal:

Nucleic Acids Research

Année:

2016

Langue:

english

Fichier:

PDF, 15.97 MB

english, 2016

24

Global analysis of pre-mRNA subcellular localization following splicing inhibition by spliceostatin A

Yoshimoto, Rei, Kaida, Daisuke, Furuno, Masaaki, Burroughs, A. Maxwell, Noma, Shohei, Suzuki, Harukazu, Kawamura, Yumi, Hayashizaki, Yoshihide, Mayeda, Akila, Yoshida, Minoru

Journal:

Année:

2016

Langue:

english

Fichier:

PDF, 2.49 MB

english, 2016

25

RNA damage in biological conflicts and the diversity of responding RNA repair systems

Burroughs, A. Maxwell, Aravind, L.

Journal:

Nucleic Acids Research

Année:

2016

Langue:

english

Fichier:

PDF, 10.81 MB

english, 2016

26

Novel clades of the HU/IHF superfamily point to unexpected roles in the eukaryotic centrosome, chromosome partitioning, and biologic conflicts

Burroughs, A. Maxwell, Kaur, Gurmeet, Zhang, Dapeng, Aravind, L.

Journal:

Année:

2017

Langue:

english

Fichier:

PDF, 2.69 MB

english, 2017

27

Polyvalent proteins: A pervasive theme in the inter-genomic biological conflicts of bacteriophages and conjugative elements

Iyer, Lakshminarayan M., Burroughs, A. Maxwell, Anand, Swadha, de Souza, Robson F., Aravind, L.

Journal:

Journal of Bacteriology

Année:

2017

Langue:

english

Fichier:

PDF, 1.67 MB

english, 2017

28

An integrated expression atlas of miRNAs and their promoters in human and mouse

de Rie, Derek, Abugessaisa, Imad, Alam, Tanvir, Arner, Erik, Arner, Peter, Ashoor, Haitham, Åström, Gaby, Babina, Magda, Bertin, Nicolas, Burroughs, A Maxwell, Carlisle, Ailsa J, Daub, Carsten O, Detm

Journal:

Nature Biotechnology

Année:

2017

Langue:

english

Fichier:

PDF, 46.54 MB

english, 2017

29

RNA-Interference Components Are Dispensable for Transcriptional Silencing of the Drosophila Bithorax-Complex

Cernilogar, Filippo M., Burroughs, A. Maxwell, Lanzuolo, Chiara, Breiling, Achim, Imhof, Axel, Orlando, Valerio, Partridge, Janet F.

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1.38 MB

english, 2013

30

Successful Integration of Adenosine Triphosphate (ATP) Technology in the Endoscopy Department

Kruedelbach, Georgine, Miller, Michael, Madariaga, Miguel, Lee, Donna, Wegener, Barb, Feeny, Kathleen, Larkin, Jayne, Maxwell, Tanya, Emery, Chantel, Salamone, Darlene, Burroughs, Ryan

Journal:

American Journal of Infection Control

Année:

2017

Langue:

english

Fichier:

PDF, 124 KB

english, 2017

31

Enhancing Infection Prevention Influence with a Social Media Application

Lee, Donna, Kruedelbach, Georgine, Larkin, Jayne, Maxwell, Tanya, Salamone, Darlene, Burroughs, Ryan, Abdulali, Mustafa

Journal:

American Journal of Infection Control

Année:

2018

Langue:

english

Fichier:

PDF, 102 KB

english, 2018

32

Identifying and characterizing functional 3’ nucleotide addition in the miRNA pathway

Burroughs, A. Maxwell, Ando, Yoshinari

Journal:

Année:

2018

Fichier:

PDF, 493 KB

2018

33

Identifying and characterizing functional 3’ nucleotide addition in the miRNA pathway

Burroughs, A. Maxwell, Ando, Yoshinari

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 493 KB

english, 2018

34

The natural history of ubiquitin and ubiquitin-related domains

Burroughs, Alexander Maxwell

Journal:

Frontiers in Bioscience

Année:

2012

Langue:

english

Fichier:

PDF, 2.83 MB

english, 2012

35

Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile Elements

Krishnan, Arunkumar, Burroughs, A. Maxwell, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Année:

2018

Langue:

english

Fichier:

PDF, 6.77 MB

english, 2018

36

Deciphering the Role of a SLOG Superfamily Protein YpsA in Gram-Positive Bacteria

Brzozowski, Robert S., Huber, Mirella, Burroughs, A. Maxwell, Graham, Gianni, Walker, Merryck, Alva, Sameeksha S., Aravind, L., Eswara, Prahathees J.

Journal:

Frontiers in Microbiology

Année:

2019

Fichier:

PDF, 4.92 MB

2019

37

Deciphering the Role of a SLOG Superfamily Protein YpsA in Gram-Positive Bacteria

Brzozowski, Robert S., Huber, Mirella, Burroughs, A. Maxwell, Graham, Gianni, Walker, Merryck, Alva, Sameeksha S., Aravind, L., Eswara, Prahathees J.

Journal:

Frontiers in Microbiology

Année:

2019

Langue:

english

Fichier:

PDF, 4.92 MB

english, 2019

38

The Origin and Evolution of Release Factors: Implications for Translation Termination, Ribosome Rescue, and Quality Control Pathways

Burroughs, A. Maxwell, Aravind, L

Journal:

International Journal of Molecular Sciences

Année:

2019

Fichier:

PDF, 1.94 MB

2019

39

Oxidative opening of the aromatic ring: tracing the natural history of a large superfamily of dioxygenase domains and their relatives

Burroughs, A. Maxwell, Glasner, Margaret E., Barry, Kevin P., Taylor, Erika A., Aravind, L.

Journal:

Journal of Biological Chemistry

Année:

2019

Langue:

english

Fichier:

PDF, 5.75 MB

english, 2019

40

Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum

SchÃ¤ffer, Daniel E., Iyer, Lakshminarayan M., Burroughs, A. Maxwell, Aravind, L.

Journal:

Frontiers in Genetics

Année:

2020

Fichier:

PDF, 6.61 MB

2020

41

Identification of uncharacterized components of prokaryotic immune systems and their diverse eukaryotic reformulations

Burroughs, A. Maxwell, Aravind, L.

Journal:

Journal of Bacteriology

Année:

2020

Fichier:

PDF, 3.29 MB

2020

42

Comprehensive classification of ABC ATPases and their functional radiation in nucleoprotein dynamics and biological conflict systems

Krishnan, Arunkumar, Burroughs, A Maxwell, Iyer, Lakshminarayan M, Aravind, L

Journal:

Nucleic Acids Research

Année:

2020

Fichier:

PDF, 5.36 MB

2020